H-Representation of the Kimura-3 Polytope
نویسندگان
چکیده
Given a group-based Markov model on a tree, one can compute the vertex representation of a polytope which describes the associated toric variety. The half-space representation, however, is not easily computable. In the case of Z2 or Z2 × Z2, these polytopes have applications in the field of phylogenetics. We provide a half-space representation for the m-claw tree where G = Z2 × Z2, which corresponds to the Kimura-3 model of evolution.
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